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Gene Aspscr1 Species Mouse Transcripts 3 RefSeqs (NM) Transcript Type Coding Product Type Silencer® Select Availability Made to Order Catalog # StandardASPSCR1 gene (UBXN9 gene), aka alveolar soft part sarcoma chromosome region, candidate 1, is one of our human genes, belonging to the UBX domain containing family (UBXN gene group)Fusion gene information Fusion gene name ASPSCR1_HGS Fusion gene ID 3028 Hgene Tgene Gene symbol ASPSCR1 HGS Gene ID 9146 Gene name ASPSCR1, UBX

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Aspscr1 gene-Nextday shipping cDNA ORF clones derived from ASPSCR1 ASPSCR1, UBX domain containing tether for SLC2 available at GenScript, starting from $9900 Translocation t (X;17) (p11;q25) with TF forms a ASPSCR1TF fusion protein 1 Publication Manual assertion based on experiment in i Ref1 "The der (17)t (X;17) (p11;q25) of human alveolar soft part sarcoma fuses the TF transcription factor gene to ASPL, a

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Oncogenic rearrangements of the TF transcription factor gene are found in two distinct human cancers These include ASPSCR1TF in all cases of alveolar soft part sarcoma (ASPS) and ASPSCR1TF, PRCCTF, SFPQTF and others in a subset of paediatric and adult RCCs Here we examined the functi ASPSCR1 expression was also found in all cancer cell lines tested Independently, Heimann et al (01) identified the ASPSCR1 gene, which they called RCC17, partnered with TF in two 5yearold Belgian girls of African origin in whom papillary renal cell carcinomas () carried the translocation t(X;17)(p112;q25)Hybrid/Mutated Gene 5' ASPSCR13' TF Abnormal Protein NH2 term ASPSCR1, fused to the C term of TF Bibliography Primary renal neoplasms with the ASPLTF gene fusion of alveolar soft part sarcoma a distinctive tumor entity previously included among renal cell carcinomas of children and adolescents

View mouse Aspscr1 Chr with phenotypes, sequences, polymorphisms, proteins, references, function, expressionOncoKB is a precision oncology knowledge base developed at Memorial Sloan Kettering Cancer Center that contains biological and clinical information about genomic alterations in cancerAspscr1 gene expression in Bgee We are happy to announce that we have released the new Bgee 15 version as a beta test

 ASPSCR1 (ASPSCR1 Tether For SLC2, UBX Domain Containing) is a Protein Coding gene Diseases associated with ASPSCR1 include Alveolar Soft Part Sarcoma and Renal Cell Carcinoma, Xp11AssociatedAmong its related pathways are Vesiclemediated transport and Translocation of GLUT4 to the plasma membraneCases with ASPSCR1TF, SFPQTF, PRCCTF, and NONOTF gene fusion showed a wide variability in morphologic features, including invasive tubulopapillary pattern simulating collecting duct carcinoma, extensive calcification and ossification, and overlapping and high columnar cells with nuclear grooves mimicking tall cell variant of papillary thyroid carcinomaFunctional Associations ASPSCR1 has 4,6 functional associations with biological entities spanning 8 categories (molecular profile, organism, chemical, functional term, phrase or reference, disease, phenotype or trait, structural feature, cell line, cell type or tissue, gene, protein or microRNA) extracted from 77 datasets

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Alveolar soft part sarcoma with ASPSCR1 TF fusion Cytogenetics der (X)t (X;17) (p11;q25) is consistently involved;Also known as ASPL, UBXD9, TUG, UBXN9, ASPS;ASPSCR1 gene product ASPL, ASPS, TUG, UBXD9, UBXN9 The protein encoded by this gene contains a UBX domain and interacts with glucose transporter type 4 (GLUT4) This protein is a tether, which sequesters the GLUT4 in intracellular vesicles in muscle and fat cells in the absence of insulin, and redistributes the GLUT4 to the plasma membrane

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Compare & Order ASPSCR1 plasmids, CDNA clones, ORF clones and more genomics products Wide variety of Top suppliers Highquality customer supportHuman Gene ASPSCR1 (uc002kcy3) Description Homo sapiens alveolar soft part sarcoma chromosome region, candidate 1 (ASPSCR1), transcript variant 2, mRNA RefSeq Summary (NM_) The protein encoded by this gene contains a UBX domain and interacts with glucose transporter type 4 (GLUT4)ASPSCR1 Gene Record Summary;

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ASPSCR1TF In order to characterize the fusion gene associated with ASPS and its role in sarcomagenesis, we created a mouse allele designed to express ASPSCR1TF conditionally Briefly, the Rosa26LSLAT3 allele was generated by isolating the type 2 ASPSCR1TF fusion gene transcript from total RNA obtained from a human ASPS Xp11 translocation renal cell carcinomas harbor chromosome translocations involving the Xp11 breakpoint, resulting in gene fusions involving the TF gene The most common subtypes are the ASPSCR1All transcript variants in gene ASPSCR1 The variants shown are described using the NM_ transcript reference sequence Legend Please note that a short description of a certain column can be displayed when you move your mouse cursor over the column's header and hold it still

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 Gene ID , updated on 16Oct21 Summary The protein encoded by this gene contains a UBX domain and interacts with glucose transporter type 4 (GLUT4) This protein is a tether, which sequesters the GLUT4 in intracellular vesicles in muscle and fat cells in the absence of insulin, and redistributes the GLUT4 to the plasma membrane within minutes of insulinPlease quote AceView a comprehensive cDNAsupported gene and transcripts annotation, Genome Biology 06, 7(Suppl 1)S12 Map on chromosome 17, links to other databases and other names Map This gene ASPSCR1 maps on chromosome 17, at 17q253 according to Entrez GeneFull data view for gene ASPSCR1;

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Gene Aspscr1 OTTMUSG Description alveolar soft part sarcoma chromosome region, candidate 1 (human) Location Chromosome 11 1,672,9731,709,447 forward strand About this gene This gene has 22 transcripts (splice variants) and 1 orthologue Transcripts Show transcript table Hide transcript table NamePenzel, R Aims Alveolar soft part sarcoma (ASPS) is a rare soft tissue tumour with unique In this study, we demonstrate that essentially all alveolar soft part sarcomas, which harbor the ASPSCR1TF gene fusion, diffusely express

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Tethering protein that sequesters GLUT4containing vesicles in the cytoplasm in the absence of insulin Modulates the amount of GLUT4 that is available at the cell surface (By similarity) Enhances VCP methylation catalyzed by VCPKMT The protein encoded by this gene contains a UBX domain and interacts with glucose transporter type 4 (GLUT4) This protein is a tether, which sequestersHUMAN PROTEIN ATLAS SUMMARYi General description of the gene and the encoded protein (s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project Proteini Full gene name according to HGNC ASPSCR1, UBX domain containing tether for SLC2 Gene namei Detection of the ASPSCR1–TF gene fusion in paraffin‐embedded alveolar soft part sarcomas Detection of the ASPSCR1–TF gene fusion in paraffin‐embedded alveolar soft part sarcomas Aulmann, S;

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GENERAL INFORMATIONi General description of the gene and the encoded protein (s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project Gene namei Official gene symbol, which is typically a short form of the gene name, according to HGNC ASPSCR1Context PubMed ASPSCR1 Title/Abstract AND TF Title/Abstract AND fusion Title/Abstract Functional or gene categories assigned by FusionGDB annotation Oncogene involved fusion gene, inframe and retained their domain * DoF score (Degree of Frequency) = # partners X # break points X # cancer typesDescription Homo sapiens ASPSCR1 tether for SLC2, UBX domain containing (ASPSCR1), transcript variant 2, mRNA (from RefSeq NM_) RefSeq Summary (NM_) The protein encoded by this gene contains a UBX domain and interacts with glucose transporter type 4 (GLUT4) This protein is a tether, which sequesters the GLUT4 in intracellular vesicles in muscle

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ASPSCR1 Clinically Actionable Alternate Names ASPSCR1, UBX DOMAIN CONTAINING TETHER FOR SLC2 ASPSCR1 ASPCR1 ASPL ASPS RCC17 TUG UBXD9 UBXN9 135 ENSG OTTHUMG As for gene abnormality, ASPSCR1TF fusion gene is observed in all ASPS cases To understand the exact mechanisms of ASPSCR1TF and tumorigenesis of ASPS, we have developed an ex vivo mouse model for human ASPS (Tanaka et al, Cancer Res 17;77(4)My Genes Showing 25 of 1,900 Results for ASPSCR1 Search Time 0 ms Showing 25 50 100 0 500 See All of 1,900 Results for ASPSCR1 Search Time 0 ms

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It implicates 1 the formation of a hybrid gene at the breakpoint, and also, 2 gain in Xp11pter sequences, and loss of heterozygocity in 11q25qter, with possible implications Hybrid/Mutated GeneSequence variants and/or copy number variants (deletions/duplications) within the ASPSCR1 gene will be detected with >99% sensitivity Variants classified as unknown significance (VUS), likely pathogenic, or pathogenic will be reported Benign and liASPSCR1 (arrow) was detected using the purified antibody ASPSCR1 Antibody flow cytometry of HeLa cells (right histogram) compared to a negative control cell (left histogram) FITCconjugated goatantirabbit secondary antibodies were used for the analysis

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Gene/Locus name ASPSCR1 (also called ASPS,ASPL,UBXD9,UBXN9,TUG) Long Name ASPSCR1 tether for SLC2, UBX domain containing (OMIM ) Laboratories Xing Genomic Services Xing Cancer Care QLD (test Comprehensive Cancer Panel )Census gene This is a known cancer gene, from Tier 1 of the Cancer Gene Census Tier 1 genes have documented evidence of their relevance to cancer This is NOT an expert curated gene Mouse insertional mutagenesis experiments DO NOT support the designation of ASPSCR1 as a cancer causing gene This gene has a cancer hallmarkFull name ASPSCR1 tether for SLC2, UBX domain containing;

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Biological context of ASPSCR1 In two young girls, we demonstrate that this translocation results in the fusion of a novel gene, designated RCC17, at chromosome 17q25, to the transcription factor TF located on the Xp11 chromosomal region ;Type protein_coding_gene Location Chr 11 Mapping Details/Browsers Description Human ortholog(s) of this gene implicated in alveolar soft part sarcoma ASPSCR1 160 Annotation score Annotation score1 out of 5 The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome This score cannot be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein

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ASPSCR1 is altered in 011% of all cancers with alveolar soft part sarcoma, translocationassociated renal cell carcinoma, high grade ovarian serous adenocarcinoma, endometrial endometrioid adenocarcinoma, and unknown having the greatest prevalence of alterationsPhenotype data for mouse gene Aspscr1 Discover Aspscr1's significant phenotypes, expression, images, histopathology and more Data for gene Aspscr1 is all freely available for downloadThe ASPL cDNA open reading frame encodes a predicted protein of 476 amino acids that contains within its carboxyterminal portion of a UBX

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3 ASPSCR1 TEXT A number sign (#) is used with this entry because some cases of alveolar soft part sarcoma have been found to be caused by fusion of the ASPSCR1 () and TF () genes Description Alveolar soft part sarcoma is an unusual tumor with highly characteristic histopathology and ultrastructureIn addition to wildtype TF, ASPSCR1TF fusion transcripts (three type 1 and two type 2 transcripts) were detected in all cases Conclusions Molecular confirmation of ASPSCR1TF gene fusion is applicable to routinely processed archival and diagnostic tumour samples and aids in the differential diagnosis of ASPSNextday shipping cDNA ORF clones derived from ASPSCR1 ASPSCR1, UBX domain containing tether for SLC2 available at GenScript, starting from $9900

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Gene symbol ASPSCR1 Gene name alveolar soft part sarcoma chromosome region, candidate 1 Chromosome 17 Chromosomal band q25 ImprintedZDBGENE Name ASPSCR1 tether for SLC2, UBX domain containing Symbol aspscr1 Nomenclature History Previous Names zgc;

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